I found how to attach the disk with a combination of the GUI and console.
1 Make sure you have a VM created with the same ID as the ID used on the disk. (I assume you can just rename the disk file name too if you have access to it). So if you have vm-100-disk-2 then you need a VM created with ID of 100.
2 Then do a qm rescan in the console of the Proxmox server.
3 Then the disks show up magically as unused disks in the GUI, under the hardware option within the specific VM
4 Then click edit on them, make sure they look right and click OK.
All done.