S3 Garbage Collection Seems Stuck, PBS 4.1.4

Jan 13, 2026
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Hi all.

I'm running a garbage collection on my S3 backup after a prune job. I'm anticipated several TBs of data to be removed. The process went through the marking stage with all the usual "marked x% (x of x index files)" listed in a reasonable time. Then it seems to have stopped on "Start GC phase2 (sweep unused chunks)" and not moved on after 3.5 hours. On my home system I do get the list showing "processed x% (x chunks)" Anything I can check to see something is happening. Nothing I can see in syslog, very little activity, CPU, IOPS, Network etc.
 
Quick update, looking at previous GC jobs phase 2 does appear to be a big operation with a single step that does take some time. It then goes onto phase 3 with percentages. As this is a lot of data it looks like phase 2 will be a long process. I'll post back when/if something happens.