Yes, the bridge is VLAN aware, the bridge connects to the bond, the bond connects to the interfaces.
INI:
# Interface 1
auto eno12399np0
iface eno12399np0 inet manual
# Interface 2
auto eno12409np1
iface eno12409np1 inet manual
# Public LACP
auto bond0
iface bond0 inet manual
bond-slaves eno12399np0 eno12409np1
bond-miimon 100
bond-mode 802.3ad
bond-xmit-hash-policy layer2+3
# Guest bridge
auto vmbr0
iface vmbr0 inet manual
bridge-ports bond0
bridge-stp off
bridge-fd 0
bridge-vlan-aware yes
bridge-vids 100 101 102 110
# Management interface
auto vmbr0.110
iface vmbr0.110 inet static
address 10.x.x.x/24
gateway 10.x.x.x