Have you installed OMV in UEFI mode?
bios: ovmf
You need to install first Debian in UEFI mode and then add OMV repo. There is a guide in OMV forum, but I am not allowed to post links yet.
mkyb14, try without "pcie=1". It worked for me. I am running OMV 3 @ Proxmox 5 on Supermicro X10SRH-CLN4F and I passed through the on-board LSI SAS 3008. However, I am not sure how big impact it might have on performance to omit "pcie=1" option.
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